Hsiao CD, Hsieh FJ, Tsai HJ. 2001. Enhanced expression and stable transmission of transgenes flanked by inverted terminal repeats from adeno-associated virus in zebrafish. Dev Dynamics 220:323-336.
Hsiao CD, Tsai WY, Tsai HJ. 2002. Isolation and expression of two zebrafish homologues of parvalbumin genes related to chicken CPV3 and mammalian oncomodulin. Mech Dev 119S:S161-166.
Hsiao CD, Tsai WY, Horng LS, Tsai HJ. 2003. Molecular structure and developmental expression of three muscle-type troponin T genes in zebrafish. Dev Dynamics 227:266-279.
Huang CJ, Tu CT, Hsiao CD, Hsieh FJ, Tsai HJ. 2003. Germ-line transmission of myocardium-specific GFP transgene reveals critical regulatory elements in the cardiac myosin light 2 promoter of zebrafish. Dev Dynamics 228:30-40.
Hsiao CD, Tsai HJ. 2003. Transgenic zebrafish with fluorescent germ cell: a useful tool to visualize germ cell proliferation and juvenile hermaphroditism in vivo. Dev Biol 262:313-323.
Hsiao CD, Ekker M, Tsai HJ. 2003. Skin-specific expression of ictacalcin, a member of S100 genes, during zebrafish embryogenesis. Dev Dynamics 228:745-750.
Chu SL, Weng CF, Hsiao CD, Hwang PP, Chen YC, Ho JM, Lee SJ. 2006. Profile analysis of expressed sequence tags derived from the ovary of tilapia, Oreochromis mossambicus. Aquaculture 251: 537-548.
Lin WD, Chen YC, Ho JM, Hsiao CD. 2006. GOBU: an integrative interface for? manipulating biological objects. J Inf Sci Eng 22:19-29
Chen YC, Hsiao CD*, Lin WD, Hu CM, Hwang PP, Ho JM. 2006. ZooDDD: an inter-species database for DDD analysis. Bioinformatics 22:2180-2182 [*Co-first author]
Hsiao CD, You MS, Guh, YJ, Ma M, Jiang YJ, Hwang PP. 2007. A Positive Regulatory Loop between foxi3a and foxi3b is Essential for Specification and Differentiation of the Zebrafish Epidermal Ionocytes. PLoS ONE 2:e302
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